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P.abies 1.0 gene MA_58982g0020
404

Basic
Functional
Sequence
Expression
Gene Family
Community Annotation

Chromosome	Start	End	Confidence	Trinity id	Subject length	Subject coverage	Subject strand	Query strand
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Gene Description based on Blast2GO: Epidermis-specific secreted glyco EP1-like

Populus Transcript name: Potri.011G110200.1
Arabidopsis id: AT1G78850.1

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Gene Ontology values could not be found for MA_58982g0020 gene.

PFAM ID	Description
PF01394	Clathrin propeller repeat
PF01453	D-mannose binding lectin

CDS Sequence

Legend: CDS START STOP

>MA_58982g0020[390 nucleotides] 
ATGCCACATGATTCTATCCACAACAATGACATTTTCCAGCTAGTTTTCTTCAACACCACGCCCAATTCCTATGCCCTGGCCATTCATATGGGCTATTTTGGACAAGCGGAAACCATGAGGTTCATGTGGACTGCTAACAGGAATGATCTCGTCCGAGAGAATGCCACTCTCAAATATGGCATTGACGGAAACCTCCTCCTCTCTGATGCAGACGATCGTGTTGTTTGGTCCACAAACACTTCAAACAAGGGCATTGTGGGAATCAAACTCCAGAACAATGACAACCTGGTGCTCTATGAAAAACAAAACAAAACGGTGTGGCAAAGTTTTGATCATGCGAACAACAGTCTCTTAGTCGGGCAGTCACTGAACATTGGATGGGTGAAGTAA

Genomic Sequence (+ strand) upstream: downstream:

Legend: CDS

>MA_58982:19429-19818[390 nucleotides] 
ATGCCACATGATTCTATCCACAACAATGACATTTTCCAGCTAGTTTTCTTCAACACCACGCCCAATTCCTATGCCCTGGCCATTCATATGGGCTATTTTGGACAAGCGGAAACCATGAGGTTCATGTGGACTGCTAACAGGAATGATCTCGTCCGAGAGAATGCCACTCTCAAATATGGCATTGACGGAAACCTCCTCCTCTCTGATGCAGACGATCGTGTTGTTTGGTCCACAAACACTTCAAACAAGGGCATTGTGGGAATCAAACTCCAGAACAATGACAACCTGGTGCTCTATGAAAAACAAAACAAAACGGTGTGGCAAAGTTTTGATCATGCGAACAACAGTCTCTTAGTCGGGCAGTCACTGAACATTGGATGGGTGAAGTAA

Peptide Sequence

>MA_58982p0020[129 residues] 
MPHDSIHNNDIFQLVFFNTTPNSYALAIHMGYFGQAETMRFMWTANRNDLVRENATLKYGIDGNLLLSDADDRVVWSTNTSNKGIVGIKLQNNDNLVLYEKQNKTVWQSFDHANNSLLVGQSLNIGWVK*

PlantGenIE GeneLists

Gene Family	Genes
Arabidopsis thaliana	AT1G78860; AT1G78850; AT1G78830; AT1G16905; AT1G78820;
Picea abies	MA_10426357g0020; MA_8460571g0010; MA_58982g0020;
Pinus taeda	PITA_000094036-RA;
Populus trichocarpa	Potri.011G110000; Potri.011G110500; Potri.011G110200; Potri.011G110300; Potri.001G391300; Potri.001G391200; Potri.011G066200; Potri.010G005900; Potri.010G008900; Potri.001G391000; Potri.004G057200;
Selaginella moellendorffii	SM00070G01750; SM00064G01280; SM00002G02420; SM00024G03150; SM00087G01760; SM00084G01220; SM00011G01420; SM00007G00970; SM00014G00960; SM00084G01230; SM00102G01470; SM00021G02220; SM00031G01530; SM00031G00820;
Vitis vinifera	VV12G03360; VV19G01860; VV12G03530;

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Primary links

P.abies 1.0 gene MA_58982g0020 404

P.abies 1.0 gene MA_58982g0020
404