gene models | Congenie.org

P.abies 1.0 gene MA_218947g0010
42

Basic
Functional
Sequence
Expression
Gene Family
Community Annotation

Chromosome	Start	End	Confidence	Trinity id	Subject length	Subject coverage	Subject strand	Query strand
Loading data from server

Gene Description based on Blast2GO: G-type lectin S-receptor-like serine threonine- kinase SD2-5

Populus Transcript name: Potri.006G254600.1
Arabidopsis id: AT4G32300.1

Map Image:

GO ID	Name Space	Description
GO:0031625	molecular_function	ubiquitin protein ligase binding
GO:0004672	molecular_function	protein kinase activity
GO:0030246	molecular_function	carbohydrate binding
GO:0005886	cellular_component	plasma membrane

PFAM ID	Description
PF00069	Protein kinase domain
PF01636	Phosphotransferase enzyme family
PF03109	ABC1 family
PF06293	Lipopolysaccharide kinase (Kdo/WaaP) family
PF07714	Protein tyrosine kinase

CDS Sequence

Legend: CDS START STOP

>MA_218947g0010[1389 nucleotides] 
ATGCTAACCAAGCTATTGACCGTCTTCCTCACACGCAAATATACTTTACGGTGTGAAAGACGAGATCGGCGTTCTCCTCCCAGTAAGATTAAAGGCGGTATTTCTCCTCCCTATGGAATTGAAGGAGTCGATACTTCTCCTCTCTGCGCGAATGTAGCTGCGCCCGATGATTTTGATAGAGATTATCTGAAGAATTTAATAGGTCTTCCAACAATATTCAGTTTCCAGGCCCTGGAGACGGCCACGGGCAGCTTCGGCAAGGAGATTGGAAGGGGAGGATTTGGGAAAGTATACAAAGGAACTTTGATGGATGGTACTGAAGTAGCCGTGAAATGTCTACTCAATCAGACGGGGCACGCTGATCAAGTTGAGCCGGATGATTTTGATAGAGATAGTCTGAAGAATTTGATTGGTCTTCCAACAATATTCAGTTTCCAGGCCCTGGAGACGGCCACGGGCAGCTTCAGCAAAGAGATTGGAAGGGGAGGATTTGGGAAAGTATACAAAGGAACTTTGATGGATGGTACTGAAGTAGCCGTGAAATGTCTACTCAATCAGACGGGGCACGGACAGCGGGAGTTTTGTGCAGAAATCGCCACCATATCCTCCCTCAATCATTCCAATCTCGTGAGCTTGCGGGGTGTTTGTGTGGAAAGGTGCCATCGTATTCTCGTCTACGAACTCATGCCCAACGGGTCTCTGGATAGATGGCTGTTCAACTCAGACAAACAGCTGGATTGGAAGACTAGATATTCCATTGCGCTCGACACTGCTCGGGGACTTGCGTACCTGCACGAAGAGTCCAGACTCGGTATTCTGCATCTGGATGTCAAACCTCAGAACATTCTCTTAGATGAGGATTTCAAGGCGAAAGTCTCCGATTTCGGCATGGCAAGGTCTCTGAACAGAGATTCAGAAAGCTCCGTGATGACAGGGATGAGAGGGACGCCGGGATACATGGCGCCCGAGTGGCTTTTGGAGAGGGGAATCACTTACAAGACTGACGTGTTCAGCTATGGAATGGTGCTTCTGGAAATAGTTAGGGGGAGTAAGAACGTGGATCATTCTCAGGATTCGGAAAATTGGTATTTTCCTTCTGTTGCTTTCCAGAAGGCCAGGCAAGGAAAAATGGATGAATTGATACAGAGCGGATTGCAATTGAAAAGGCCACAGGAAATGGATGAGGCGCATCGGTTGATAAATACGGCGTTGTGGTGTATTCAAAACAATTCGGCGCTGAGGCCTTCAATGGGAACGGTGGTGCGATTCTTAGAGGGAGAATTAGAGGTCATGGATCCTCCATTAACTTACATGCTTCCATTCGCCTCGTCAACAGATGACGAGACGCTCACGGATTTGGATTGCGAAGGCGGGCAGGAATTTTCCTGA

Genomic Sequence (+ strand) upstream: downstream:

Legend: CDS

>MA_218947:2212-3769[1558 nucleotides] 
ATGCTAACCAAGCTATTGACCGTCTTCCTCACACGCAAATATACTTTACGGTGTGAAAGACGAGATCGGCGTTCTCCTCCCAGTAAGATTAAAGGCGGTATTTCTCCTCCCTATGGAATTGAAGGAGTCGATACTTCTCCTCTCTGCGCGAATGTAGCTGCGCCCGATGATTTTGATAGAGATTATCTGAAGAATTTAATAGGTCTTCCAACAATATTCAGTTTCCAGGCCCTGGAGACGGCCACGGGCAGCTTCGGCAAGGAGATTGGAAGGGGAGGATTTGGGAAAGTATACAAAGGAACTTTGATGGATGGTACTGAAGTAGCCGTGAAATGTCTACTCAATCAGACGGGGCACGCTGATCAAGGTATTAATTTTCTATCTGACACGGAGGTATACTTTAAGGCTTGAAAGACGCAAAGAGCGTTCTCCTCCCAGCGAGATTGAAGGCGGTATTTCAAGTGACATTGAAGGTGGTATTTCTCCTCCCTATGGAATTGAATGAGTCGATATTTCTCCTCTCTGCGCGATTGTAGTTGAGCCGGATGATTTTGATAGAGATAGTCTGAAGAATTTGATTGGTCTTCCAACAATATTCAGTTTCCAGGCCCTGGAGACGGCCACGGGCAGCTTCAGCAAAGAGATTGGAAGGGGAGGATTTGGGAAAGTATACAAAGGAACTTTGATGGATGGTACTGAAGTAGCCGTGAAATGTCTACTCAATCAGACGGGGCACGGACAGCGGGAGTTTTGTGCAGAAATCGCCACCATATCCTCCCTCAATCATTCCAATCTCGTGAGCTTGCGGGGTGTTTGTGTGGAAAGGTGCCATCGTATTCTCGTCTACGAACTCATGCCCAACGGGTCTCTGGATAGATGGCTGTTCAACTCAGACAAACAGCTGGATTGGAAGACTAGATATTCCATTGCGCTCGACACTGCTCGGGGACTTGCGTACCTGCACGAAGAGTCCAGACTCGGTATTCTGCATCTGGATGTCAAACCTCAGAACATTCTCTTAGATGAGGATTTCAAGGCGAAAGTCTCCGATTTCGGCATGGCAAGGTCTCTGAACAGAGATTCAGAAAGCTCCGTGATGACAGGGATGAGAGGGACGCCGGGATACATGGCGCCCGAGTGGCTTTTGGAGAGGGGAATCACTTACAAGACTGACGTGTTCAGCTATGGAATGGTGCTTCTGGAAATAGTTAGGGGGAGTAAGAACGTGGATCATTCTCAGGATTCGGAAAATTGGTATTTTCCTTCTGTTGCTTTCCAGAAGGCCAGGCAAGGAAAAATGGATGAATTGATACAGAGCGGATTGCAATTGAAAAGGCCACAGGAAATGGATGAGGCGCATCGGTTGATAAATACGGCGTTGTGGTGTATTCAAAACAATTCGGCGCTGAGGCCTTCAATGGGAACGGTGGTGCGATTCTTAGAGGGAGAATTAGAGGTCATGGATCCTCCATTAACTTACATGCTTCCATTCGCCTCGTCAACAGATGACGAGACGCTCACGGATTTGGATTGCGAAGGCGGGCAGGAATTTTCCTGA

Peptide Sequence

>MA_218947p0010[462 residues] 
MLTKLLTVFLTRKYTLRCERRDRRSPPSKIKGGISPPYGIEGVDTSPLCANVAAPDDFDRDYLKNLIGLPTIFSFQALETATGSFGKEIGRGGFGKVYKGTLMDGTEVAVKCLLNQTGHADQVEPDDFDRDSLKNLIGLPTIFSFQALETATGSFSKEIGRGGFGKVYKGTLMDGTEVAVKCLLNQTGHGQREFCAEIATISSLNHSNLVSLRGVCVERCHRILVYELMPNGSLDRWLFNSDKQLDWKTRYSIALDTARGLAYLHEESRLGILHLDVKPQNILLDEDFKAKVSDFGMARSLNRDSESSVMTGMRGTPGYMAPEWLLERGITYKTDVFSYGMVLLEIVRGSKNVDHSQDSENWYFPSVAFQKARQGKMDELIQSGLQLKRPQEMDEAHRLINTALWCIQNNSALRPSMGTVVRFLEGELEVMDPPLTYMLPFASSTDDETLTDLDCEGGQEFS*

PlantGenIE GeneLists

Gene Family	Genes
Picea abies	MA_361139g0010; MA_11330g0010; MA_218947g0010; MA_10428516g0010; MA_10310998g0010; MA_14446g0010; MA_464529g0010; MA_10429842g0010; MA_36134g0010; MA_166153g0010; MA_36134g0020; MA_8972765g0010; MA_8845129g0010; MA_10164346g0010; MA_6824769g0010; MA_13270g0010; MA_618599g0010; MA_499559g0010; MA_10426854g0010;
Pinus taeda	PITA_000029196-RA; PITA_000011528-RA; PITA_000049637-RA; PITA_000040943-RA; PITA_000035787-RA; PITA_000027514-RA; PITA_000059841-RA; PITA_000009169-RA; PITA_000024812-RA; PITA_000032700-RA; PITA_000047805-RA; PITA_000030057-RA; PITA_000028079-RA; PITA_000035788-RA; PITA_000074959-RA; PITA_000048904-RA; PITA_000054434-RA; PITA_000054435-RA; PITA_000054436-RA; PITA_000035791-RA;
Selaginella moellendorffii	SM00043G00590; SM00010G02960; SM00002G01110; SM00002G02380; SM00039G00820; SM00002G00120; SM00002G04220;

Map Image:

Primary links

P.abies 1.0 gene MA_218947g0010 42

P.abies 1.0 gene MA_218947g0010
42