gene models | Congenie.org

P.abies 1.0 gene MA_126451g0020
395

Basic
Functional
Sequence
Expression
Gene Family
Community Annotation

Chromosome	Start	End	Confidence	Trinity id	Subject length	Subject coverage	Subject strand	Query strand
Loading data from server

Gene Description based on Blast2GO: G-type lectin S-receptor-like serine threonine- kinase At1g34300

Populus Transcript name: Potri.019G086400.1
Arabidopsis id: AT1G34300.1

Map Image:

Gene Ontology values could not be found for MA_126451g0020 gene.

PFAM ID	Description
PF00954	S-locus glycoprotein family
PF01453	D-mannose binding lectin
PF08133	Anticodon nuclease activator family

CDS Sequence

Legend: CDS START STOP

>MA_126451g0020[1287 nucleotides] 
ATGCTTTCAGGGCCGGTACTGCCGAATGGAATGAACACCACGGTGTGGCAGACTAACACTGCGAACCAGAGCATATCATCTGTTGTCATGCAAGACAATGACAATTTTATATTGAAGAATAACAGTTCCAACATTGTTTGGGAGAGCTTTGTCAATCCTACTGATACCCTTTTGGTTAATCAAACTTTCGGGGTGGGACAAAGCCTCCACATGTATCCTTATTCATTCACCCTGGAGTCCAGTGGCAATTTCACGTTGAAATGGAGGAAAAATATCACATACTGGAATCAGGGTGCCCCTAATGGCTCTAGAGCATGTCTAAACAATCAAGGGTTTTTTACACTCTTCAATTCTTCTCATATTCAGATCTGGATTGCATACAACAACGATTACACTGATGCCTCAATCACATTGCAAAGGATCATGCTTGAATCAGATGGTAATTTGAGGTCCTATGGGTGGTTTAAAAGCGAAGGACCATTGAAACTGGGTTGGAGTGCAATAAAATACCAATTCCAAGTGTATGGATGGTGTGGGAACTTTGGGGTGTGTGTTTACAATCACACATCCTCGTACTGCATGTGCCCATCCACAGATTTTGTACCCATAGATCCCAACGATCCCACACAAGGGTGCAACACAAAGGAGGACATTGCAGGGTGTCATAACCATAGCAGGGTTGTATTGAGCAATACTGTATTTTTTTCTTATCCTCCAGAATCAGAGTCACGGTATGAGATATACAATTTTGACAATACATATTGTGAGCAGAACTATCGAAATAACCTGAAGTCTATAGTTGCGATTCATTCTTCAACTACAGAAGATCGAAATCAACCATCAGATGTGGAGCATCAAATACGGGTCAACTACTCGCTTAGTTCGGATTCAGTTCGAGGGATCACTCCATTCACAAAGCCAGGAAGGAAGCCAGCAAGGTATAGTACAGAGGCACAGACCCTTACTGTACAGGCTGAGGGAACGTTATTGAAAGAAGGTAGGTACGGGGGGAGGCTGGCGGTCTTATCACCTCCTTGGATAATTCTTCAGCTTGGCCATGGCATTCACCATTCTGCTTCTTCACTTTGTCTCTTCGATCTTCTCGGGGATATGGCTCTGGTCCTCTCAGAATTCTCTAGCCTCATTCTCAGAGTTCTTCAGCCTCCAGGAGCTACCATCTCGATAGAGAGAGGGAAACCTAGGCGGGGACCCTCTTGGTACTATTATGTTGCAAGGAAGAGACACATGCACAATTTGGAGAGGGATTTATCCATATCCCAGACGTAG

Genomic Sequence (+ strand) upstream: downstream:

Legend: CDS

>MA_126451:43360-46314[2955 nucleotides] 
ATGCTTTCAGGGCCGGTACTGCCGAATGGAATGAACACCACGGTGTGGCAGACTAACACTGCGAACCAGAGCATATCATCTGTTGTCATGCAAGACAATGACAATTTTATATTGAAGAATAACAGTTCCAACATTGTTTGGGAGAGCTTTGTCAATCCTACTGATACCCTTTTGGTTAATCAAACTTTCGGGGTGGGACAAAGCCTCCACATGTATCCTTATTCATTCACCCTGGAGTCCAGTGGCAATTTCACGTTGAAATGGAGGAAAAATATCACATACTGGAATCAGGGTGCCCCTAATGGCTCTAGAGCATGTCTAAACAATCAAGGGTTTTTTACACTCTTCAATTCTTCTCATATTCAGATCTGGATTGCATACAACAACGATTACACTGATGCCTCAATCACATTGCAAAGGATCATGCTTGAATCAGATGGTAATTTGAGGTCCTATGGGTGGTTTAAAAGCGAAGGACCATTGAAACTGGGTTGGAGTGCAATAAAATACCAATTCCAAGTGTATGGATGGTGTGGGAACTTTGGGGTGTGTGTTTACAATCACACATCCTCGTACTGCATGTGCCCATCCACAGATTTTGTACCCATAGATCCCAACGATCCCACACAAGGGTGCAACACAAAGGAGGACATTGCAGGGTGTCATAACCATAGCAGGGTTGTATTGAGCAATACTGTATTTTTTTCTTATCCTCCAGAATCAGAGTCACGGTATGAGATATACAATTTTGACAATACATATTGTGAGCAGAACTATCGAAATAACCTGAAGTCTATAGGTGAGTTTTCTCTATTGTCGAGACTGGGAACTTGATGTCCACAGGTGGGTTTTCTCTGTTTGATACCTTCTAAGATATAAATGTGGGTAGAGACTACATAAGAAAAGTAATCTGTTTTAATCTAGTTCTCATGATCCAAAAGCGAAGTAACCAAATTTGTAGGTCTCCTAGTCTCTTGGTTAGTTCTTATTCATTTGTCAGTTGCGATTCATTCTTCAACTACAGAAGATCGAAATCAACCATCAGATGTGGAGCATCAAATACGGGTCAACTACTCGCTTAGTTCGGATTCAGTTCGAGGGATCACTCCATTCACAAAGGTTGGGTGATGCAGTATTGACAAAATCCAAGCAGGTCAAATGAGCCGCTCTACCAACTACTTGCTAAGGAGAAAGTTAACTCTGGAGTTTCACATAATTCAAAAGTAATAGTAAGTAATCTATGCAATTAAAAAAATAGATTTCTATAGAGATTTACAAGAAACTAATAATATTGTCACATATTCATCTACTGGTACTCAAGGAATCGATCCACTCGGTGGGAAGATAAATACCTTTAATCAGTCATCTAACACGGTCATCCCCTTCCCTGATTTGATGTGATATTTCCCTCCCAACATGGATAACATGTAGCCAGGAAGGAAGCCAGCAAGGTATAGTACAGAGGCACAGACCCTTACTGTACAGGCTGAGGGAACGTTATTGAAAGAAGGTAGGTAAGCCATCAAAGTACAGTACCGAGGCATGGACCCTTACTGTACAGGCTGAGGGAACGGGATTGAAAGAAGATAGGTTGTGTGATTTCACCTTCTTATTGTGCCTCAGGATTCTACTTGTGACTAGGATTGTTCCGGCCACTAGGAAATGAAAGAAGAATGTCTCTACTATATTGCAGGAAGAATTATAGCAATCTATTGGGGCTACTGTCTAAGCACATATAGAGGAGAGGAAGGAGAGTTTGGGGATACTGGAGGAAAGAGAGGCTGGGATACTGTCTGAGGACACTTTGCACAACTATGAATGAACAGGTGTGGGATTATGTGTCAATTTCATTAAGTGTAATTTTTTTTAAATTGTAAGAGGCTAAGATTGGGAAAATTCTCCTCTAACATTTAACATTTAATGATATCAAGTAATGCTAGAATTAATTCTAGCATTACTTGACTTGCGAGAAACTATTTGTTAAATTTATGTTTGAATCTCCTTTTAAGATAAGGTATAGTCTGCCTCTTCTTCGGGAAGAGGCCAAATAAGACCTCCAATTTAAAACTTAGGATAAGTAATATGAATTTTCAAATGAAGTTTATGAATTATAAAAAACTTTATCTTAAAACATTGAAAAGTCATTGGTTTCAGTGCAGAACTAATAGAAGAAGGAATAATCGATTACTATTTGAAGGGAAGGGACTAATAAAGACATTTATTAAATAATTATATTTAATTAAATGAAATAATATAAATATATTATAGTTATTGTAGTCGTTTTCAATTATTTATTATATTTAAAAAGGAATGTGATTTCTAAAATGAGTTTTTACTTATAAATATTTCATATTTATTTATATATGAATTTTAATTTTAATTTATTTTTTTAGGTATGTTTGTAAGAAGTAGGTTGTGATAGTTTTACTTTAAATAGATTAGTCATAATCGTCTTCTTTATGTAGATGATACTATTCTTTTTTGTCCCTGGATGGAGTGACACATAGGCATCCCCCATGCATACTTAGCCATAAATATGGTCAGCCGCCACCCCAAATCCCATTCTTGGATGGAGGATGGCCATAAATGGTCATAGACGGAGAGAGGATAGCTCCCCCACATAGGATTAATGACGCCCTCACTGATTAATTGAAAGGATACGATGATAGGTACGGGGGGAGGCTGGCGGTCTTATCACCTCCTTGGATAATTCTTCAGCTTGGCCATGGCATTCACCATTCTGCTTCTTCACTTTGTCTCTTCGATCTTCTCGGGGATATGGCTCTGGTCCTCTCAGAATTCTCTAGCCTCATTCTCAGAGTTCTTCAGCCTCCAGGAGCTACCATCTCGATAGAGAGAGGGAAACCTAGGCGGGGACCCTCTTGGTACTATTATGTTGCAAGGAAGAGACACATGCACAATTTGGAGAGGGATTTATCCATATCCCAGACGTAG

Peptide Sequence

>MA_126451p0020[428 residues] 
MLSGPVLPNGMNTTVWQTNTANQSISSVVMQDNDNFILKNNSSNIVWESFVNPTDTLLVNQTFGVGQSLHMYPYSFTLESSGNFTLKWRKNITYWNQGAPNGSRACLNNQGFFTLFNSSHIQIWIAYNNDYTDASITLQRIMLESDGNLRSYGWFKSEGPLKLGWSAIKYQFQVYGWCGNFGVCVYNHTSSYCMCPSTDFVPIDPNDPTQGCNTKEDIAGCHNHSRVVLSNTVFFSYPPESESRYEIYNFDNTYCEQNYRNNLKSIVAIHSSTTEDRNQPSDVEHQIRVNYSLSSDSVRGITPFTKPGRKPARYSTEAQTLTVQAEGTLLKEGRYGGRLAVLSPPWIILQLGHGIHHSASSLCLFDLLGDMALVLSEFSSLILRVLQPPGATISIERGKPRRGPSWYYYVARKRHMHNLERDLSISQT*

PlantGenIE GeneLists

Gene Family	Genes
Amborella trichopoda	scaffold00017.63; scaffold00017.67; scaffold00103.84; scaffold00068.90;
Oryza sativa ssp. japonica	OS03G62180;
Picea abies	MA_78595g0010; MA_5147g0010; MA_895977g0010; MA_7917g0010; MA_10426650g0010; MA_132342g0010; MA_91618g0010; MA_208216g0010; MA_10433041g0010; MA_202714g0010; MA_69585g0010; MA_126451g0020;
Pinus taeda	PITA_000010770-RA; PITA_000057028-RA; PITA_000026418-RA; PITA_000039323-RA; PITA_000010766-RA; PITA_000070393-RA; PITA_000000064-RA; PITA_000092193-RA; PITA_000076221-RA; PITA_000038188-RA; PITA_000068370-RA; PITA_000035863-RA; PITA_000075905-RA; PITA_000002882-RA; PITA_000071608-RA; PITA_000010764-RA; PITA_000083463-RA; PITA_000062713-RA; PITA_000082318-RA; PITA_000086506-RA; PITA_000046598-RA; PITA_000077721-RA; PITA_000026666-RA; PITA_000051097-RA; PITA_000032910-RA; PITA_000083464-RA; PITA_000047189-RA; PITA_000086505-RA; PITA_000047190-RA; PITA_000082900-RA; PITA_000050875-RA; PITA_000026667-RA;
Populus trichocarpa	Potri.013G115700; Potri.019G086200; Potri.019G086400; Potri.013G115800; Potri.019G086300; Potri.001G006100;
Selaginella moellendorffii	SM00070G01740; SM00002G02410;
Vitis vinifera	VV18G16760;
Zea mays	ZM01G58990;

Map Image:

Primary links

P.abies 1.0 gene MA_126451g0020 395

P.abies 1.0 gene MA_126451g0020
395